User Guide
Introduction
System Requirements
Getting Started
All About Your Project List
Searching
Further Help
Introduction
The
CenSSIS Image Database system is a scientific database that enables
effective collaboration, scientific data sharing and accelerates
fundamental research. The system incorporates efficient submission
and retrieval of images and metadata, indexing of metadata for
efficient searching, and complex relational query capabilities.
System
Requirements
All
that is needed to access CenSSIS-DB is a web browser. CenSSIS-DB has
been tested with the following platforms and browsers:
Windows
NT/2000/XP Internet Explorer 4.0+
Windows
NT/2000/XP Netscape Communicator 6.0+ *
Solaris
2.8 Netscape Communicator 7.0+ *
Linux
(RedHat 7, 8) Netscape Communicator 7.0+ *
Linux
(RedHat 7, 8) Mozilla 5.0
Older
versions of Netscape don't appear to handle some Javascript
correctly
Getting
Started
Accessing
CenSSIS-DB
To
access CenSSIS-DB, simply point your web browser to:
http://censsis-db1.ece.neu.edu:9080
You
will be greeted with the page in Figure 1.
Figure 1
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Registration
To
register, click on the Register link
above, circled in red. Fill out the registration form. This
registration form is your profile. Note that all
starred fields are required. Once the registration form is complete,
click on the Submit button. If any errors have been detected,
you will be prompted to fix them. Otherwise, you will be notifed
that registration was successful.
After
registration, you will automatically be logged in (Figure 2).
Figure 2
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Logging
in
If you
already have a user account and just need to log back in, enter your
username and password in the appropriate fields at the top right-hand
corner of the screen and click on the Login button.
Editing
a profile
At any
time, you can edit your user profile, with the exception of your
username. To edit your user profile, click on the Edit
Profile link (arrow 3 in Figure 2) and make the
appropriate changes. To change your password, follow the Edit
Profile link and then the Change
Password link.
Logging
out
To
ensure security, especially if you are accessing CenSSIS-DB from a
shared computer, we recommend that you log out when you are finished with your
session. To logout, simply click on the Logout
link at the top right-hand corner of the screen (arrow 4 in Figure
2).
Non-CenSSIS
Users
If you
are not a CenSSIS member or affiliate and wish to have a CenSSIS-DB
account, please contact the CenSSIS-DB Administrator:
All
about your Project List
Introduction
The central organizational unit
of CenSSIS-DB is the project.
Registered CenSSIS-DB users can define multiple projects. Each
project can have multiple folders and/or datasets associated with
it (think of how your computer organizes files and subdirectories
within a parent directory). In addition, every project can be
shared among other registered CenSSIS-DB users. This allows a
group of researchers to share datasets with one another yet not
have the datasets be publically accessible or accessible to project
non-members.
Project
List
A
user's project list can be viewed in the left-hand navigation bar
of the CenSSIS-DB site (Figure 3). To create a new project, the
user should select the Create Project
link. To add data to an existing project and/or edit existing
data, the user should select the appropriate project from the
project list.
Figure 3 |
Creating
a Project
To
create a new project, the user should select the Create
Project link. The user should enter a project title
and description (optional) and click on the Save
button (Figure 4). If project creation was successful, the user
will be returned to the project file list page seen in Figure 5.
Figure 4
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Figure 5
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Project
Listing
The
project file list is organized like a tree structure (Figure 6). To open up a
project or folder, simply click on the icon located to the left of
the project or folder name. To close and hide the contents of a
project or folder, click on the icon once more.
Figure 6
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Adding
Data
To
add data to a project or folder, click on the Add
Data link next to the project or folder name(Figure 6). A screen
containing two drop-down boxes of data types and locations will be displayed(Figure 7). Make your
selections of the type of data you want to submit and where your project is located, and then click on the
Submit button. If you do not see an appropriate data
type for your dataset, simply select generic and contact the
database administrator to setup a new data type.
Fill
out the data submission form(Figure 8) as best you can, making sure that you
fill in all required fields (starred). In order to restrict access
to the dataset, select either project or member permission level
under the Read Permission field. If you want your data to be accessible to anyone searching the website, select world permission under this field.
Attach
any files you want to attach. Up to three files may be attached. The three types of files are a dataset, sample image file, and a read me file. Note: Most internet browsers will only display the sample image file if it is a jpeg.
When you have finished filling out the data submission form, click
the Submit button. Upon submission, a dataset is immediately available for retrieval. If there are any errors, you will
be notified; otherwise you will be shown a screen containing the
data you just submitted as well as a unique image id
for that dataset.
Figure 7 |
Figure 8 |
Managing
Project Members
In
order to share data, you can add additional project members to your
project. These members must already be registered with CenSSIS-DB.
While
in project list view, select the Members
tab. You will see a screen listing the current project members and
their roles(Figure 9). Project member roles include creator, owner, and
member. The creator is the individual who created the project. An
owner is anyone who can edit project-level information and
add/delete/modify project member settings. A project member has
the ability to add/edit/delete datasets and folders.
Figure 9 |
Viewing and Editing Data
While in project list view, open the project that contains the data you wish to edit or view. Open the folders until you reach the dataset you wish to edit or view. Click on view or edit.
In order to save a dataset directly to your computer, right click on the data link you wish to download, click on "Save target as...", and then select the folder or location where the data will be saved.
Note: Excel documents may not be viewable directly from the online database depending on the web browser. If it is not accessible, save the data to your computer, and then open the file in Excel.
Searching
Who
can search?
Anyone
can search the database, both registered and non-registered users.
However, restricted material will not be available to those who do
not have access to it.
Searching
By ID
This allows you to search for a particular image or dataset by the image identification number.
Searching
By Keyword
This search option scans the descriptive metadata fields for the entered keyword(s).
Searching
By Multiple Criteria
This search option allows you to perform either general or specific searches. For each drop-down box or text field left empty, the search will provide all data under that category. Otherwise, the search will provide only the data that fulfills the criteria indicated. If all fields are left blank, the search will provide all the image datasets in the database.
Further
Help
For additional information or support,
please contact the database administrator at:
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